 Adam Husar
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4161be7b52
Support for unimol rates being changed during runtime
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4 年之前 |
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Adam Husar
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d5b2895f94
Changed rxn rate update - using ReactionRule setters instead of a method
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4 年之前 |
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Adam Husar
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55bd526d82
Added support for dynamic bimol rxn rate change
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4 年之前 |
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Adam Husar
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a3a0f163f2
Fixed several compilation issues with float32
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4 年之前 |
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Adam Husar
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4a4b056b37
Added check for minimal unimol rxn time
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4 年之前 |
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Adam Husar
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52402cd129
Renamed Wall.normal to unit_normal
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4 年之前 |
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Adam Husar
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e2f2b918fc
Added support for immediate releases through Model.release_molecules
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4 年之前 |
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Adam Husar
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83e73790c1
Added callback check, improved notification
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4 年之前 |
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Adam Husar
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867b7db545
Added support for reporting of possition the second surface reactant in
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4 年之前 |
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Adam Husar
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47e338b433
Support for rxn callbacks, full support for surf-surf rxns missing
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4 年之前 |
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Adam Husar
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59994e0e2d
Added utility script viz_Reader.py with an example for BNG analysis as a
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4 年之前 |
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Adam Husar
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0105c6ee5c
Added support for volume reaction callbacks, also fixed wall hit
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4 年之前 |
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Adam Husar
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6856c89a3a
Improved SurfaceClass.__eq__
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4 年之前 |
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Adam Husar
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5e9e0bc99a
Removed accidentally commited files
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4 年之前 |
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Adam Husar
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6c276b7452
Improved error/warning message in append_to_vec_canonical_name
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4 年之前 |
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Adam Husar
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24a631af57
Finished printing of errors and warnings for cases when identical rxns
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4 年之前 |
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Adam Husar
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689213ab2e
Added missing reset of lexer in BNGL parser
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4 年之前 |
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Adam Husar
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eef8761d25
Creating canonical Complex And ReactionRule name with special
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4 年之前 |
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Adam Husar
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dcae0e4fee
Intermediate commit towards comparison while adding rxn rules
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4 年之前 |
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Adam Husar
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5749d25f2d
Fixed ignoring of added identical object
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4 年之前 |
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Adam Husar
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a4953de580
Fixed error and warnign messages for
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4 年之前 |
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Adam Husar
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815e54961c
Improved error message when diff constant is not set
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4 年之前 |
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Adam Husar
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1872ee8ea9
Fixed several cases for Species.__eq__ operator
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4 年之前 |
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Adam Husar
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a4a923ba9d
Checking that simple species addition is either ignored if the same or
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4 年之前 |
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Adam Husar
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43031c89ab
Added implementation of ReactionRule::__eq__ that compares canonical
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4 年之前 |
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Adam Husar
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28689ff568
Including compartment name in Complex.to_bngl_str, added check
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4 年之前 |
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Adam Husar
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fc977373ba
Recursive search for free tile in search_nbhd_for_free
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4 年之前 |
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Adam Husar
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73e06d7e06
Generation of observables into BNGL
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4 年之前 |
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Adam Husar
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e680f56def
Reorganized generation of observables from data model to prepare for
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4 年之前 |
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Adam Husar
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15def8dffa
Updated plotter script to use pandas
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4 年之前 |
