 Adam Husar
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81609fc391
Generating method eq_nonarray_attributes used in method __eq__ of
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4 年之前 |
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Adam Husar
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1be8580b7c
Fixed Complex.__eq__ to handle components in different order
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4 年之前 |
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Adam Husar
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ab723c1035
Fixed __eq__ operator for molecule and component types and instances
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4 年之前 |
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Adam Husar
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735e65f686
Added method to_bngl_str to ElementaryMoleculeType and ComponentType
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4 年之前 |
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Adam Husar
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2d5679e6c6
Added __eq__ to all API classes and makde Complex use canonical form for
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4 年之前 |
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Adam Husar
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8d3d11cc46
Added option Config.sort_molecules to enable sorting of molecules by
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4 年之前 |
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Adam Husar
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87b28be094
Added check for maximum reaction radius and reenabled legacy subpart
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4 年之前 |
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Adam Husar
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69f3f2c085
Fixed API class generation when it has not attributes
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4 年之前 |
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Adam Husar
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9f1b516222
Added colon to Attributes and Methods in generated rst
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4 年之前 |
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Adam Husar
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7c74d4b586
Improved documentation generation and added generation of enums and
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4 年之前 |
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Adam Husar
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9c49697bf7
Fixed generation of mcell.pyi
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4 年之前 |
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Adam Husar
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fed05f784c
Integrated documentation generator
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4 年之前 |
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Adam Husar
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8713ae035d
Not creating new object for a compartment if object with this name
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4 年之前 |
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Adam Husar
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add0b08b31
Made load_bngl argument observables_files_prefix optional
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4 年之前 |
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Adam Husar
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f119e16f40
Lowered required C++ standard from C++17 to C++14
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4 年之前 |
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Adam Husar
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9e9dc0b05e
Renamed bng/defines_shared.(h|cpp) to shared_defines.(h|cpp)
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4 年之前 |
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Adam Husar
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00eb53cae3
Improved f_to_str by removeing excessive zeroes
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4 年之前 |
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Adam Husar
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7689aa362e
Reports are generated into the reports directory
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4 年之前 |
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Adam Husar
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9b8f949676
Generating model.notifications.rxn_and_species_report = True in data
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4 年之前 |
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Adam Husar
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79bb63a4c2
Added ReactionRule.to_bngl_str()
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4 年之前 |
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Adam Husar
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6aaf42c487
Renamed box_no_compartment to default_compartment, fixed error message
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4 年之前 |
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Adam Husar
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b6fc75ae33
Added time_step export and fixed volume precision issue
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4 年之前 |
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Adam Husar
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d9362fde9b
Fixed BNGL export of rxns A -> Null
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4 年之前 |
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Adam Husar
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8921df7534
Missed files for previous commit
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4 年之前 |
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Adam Husar
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193ffbe7b4
Renamed export_as_bngl_to export_to_bngl, fixed compartment name
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4 年之前 |
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Adam Husar
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c15190ffd1
Added check for watertight compartment
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4 年之前 |
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Adam Husar
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d60ad5bf9d
Added computation of object volume for exported BNGL
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4 年之前 |
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Adam Husar
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ac6b199860
Support for observables export to BNGL
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4 年之前 |
|
Adam Husar
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43914c129f
Fixed rate export and added support for seed species release for bngl
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4 年之前 |
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Adam Husar
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f635019d59
Added option to compute average of the last n items in the .dat file
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4 年之前 |
