 Jed Wing
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fc393a3104
Merged changes from MCell trunk into testsuite branch prior to upload.
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15 年之前 |
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Jed Wing
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6aa68fafa4
Cleaned up and fixed the surface quantitative tests as well as possible at
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15 年之前 |
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Jed Wing
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af74f8e6ca
Disabled a few surface reaction quantitative tests until we can figure out
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15 年之前 |
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Jed Wing
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548913c174
Removed 'tempsuite'.
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15 年之前 |
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Jed Wing
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08948df9ea
Loosened up the tolerances on one of the macromolecules tests which is
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15 年之前 |
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Jed Wing
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93ffc30b4c
Added regression test for the recent parser bug Boris reported.
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15 年之前 |
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Jed Wing
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ee8e3bdf50
Changed the reaction data constraints test machinery to use numpy if it is
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15 年之前 |
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Jed Wing
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c8c121139d
Enable psyco if it is installed. This may increase the speed of the test
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15 年之前 |
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Jed Wing
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fe9c8a346f
Initial checkin of the testsuite documentation.
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15 年之前 |
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Jed Wing
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fdc6c8ecd5
Fix for failure to parse statements like {COUNT["B'", ...]}
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15 年之前 |
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Jed Wing
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6528aa27bf
Fixed a minor (innocuous) bug which, because of an uninitialized variable,
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15 年之前 |
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Jed Wing
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ae9c490641
Added a comment to the tricky bit of code which handles updating counts for
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15 年之前 |
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Jed Wing
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68ae563ed8
Reverted change to react_outcome which caused grid molecule orientations to be
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15 年之前 |
 Boris Kaminsky
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d4043b6a18
Fixed bug in the new version of 'outcome_products()' related to the case when we count reactants on the product side that change orientations during the reaction.
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15 年之前 |
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Boris Kaminsky
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7fa7d9f1c7
Fixed bug in the new version of 'outcome_products()' related to the case when we count reactants on the product side that change orientations.
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15 年之前 |
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Boris Kaminsky
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bf865a078f
Fixed bug in the functions 'react_2D()' and 'react_2D_trimol()'. The scaling coefficient related to the binding factor of the wall should be inverted.
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15 年之前 |
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Boris Kaminsky
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81b473ba10
Fixed bug in the functions 'react_2D()' and 'react_2D_trimol()'.
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15 年之前 |
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Jed Wing
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0c478854a8
Temporary commit of progress on reactions test suite.
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15 年之前 |
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Jed Wing
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36530648cc
We were taking TARGET_ONLY into account in prepare_reactions, but not in the
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15 年之前 |
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Boris Kaminsky
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fa5d553324
Merged with a trunk
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16 年之前 |
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Jed Wing
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9c69c31777
Added regression test for the crash reported and fixed by Markus.
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16 年之前 |
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Boris Kaminsky
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bd7ef45800
Fixed a bug in the function 'diffuse_3D()' related to the counting of wall hits/crossings after a volume molecule moves to another subvolume.
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16 年之前 |
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Boris Kaminsky
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4c01181c1d
Fixed a bug in the function 'diffuse_3D()' related to the counting wall hits after a volume molecule moves to another subvolume.
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16 年之前 |
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Boris Kaminsky
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da0d1b67ca
Fixed bug in the function 'release_molecules()' that occurs when release probability is less than 1.
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16 年之前 |
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Boris Kaminsky
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0c8418016d
Fixed bug in the function 'release_molecules()' that occurs when release probability is less that 1.
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16 年之前 |
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Boris Kaminsky
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0aa6ac29b8
Fixed bug in the function 'release_molecules()' that manifests itself when release probability is less than 1.
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16 年之前 |
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Boris Kaminsky
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00d7c4c6ae
Merged with trunk.
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16 年之前 |
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Jed Wing
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24c504f943
Added regression test for checkpointing bug discovered by Jacob Czech.
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16 年之前 |
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Boris Kaminsky
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d39336ff2b
Merged with a trunk.
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16 年之前 |
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Jed Wing
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467e9160c8
Update to 'current_real_time' before checkpoint was assuming that the time step
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16 年之前 |
