parameters.mdl 992 B

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  1. TIME_STEP = 1. / 1e6
  2. TIME_STEP_MAX = 1000.
  3. // SPACE_STEP = 1e-3
  4. ITERATIONS = 100*100*100
  5. CENTER_MOLECULES_ON_GRID = TRUE
  6. ACCURATE_3D_REACTIONS = TRUE
  7. VACANCY_SEARCH_DISTANCE = 5.0
  8. EFFECTOR_GRID_DENSITY = 15000
  9. INTERACTION_RADIUS = 7e-6
  10. RADIAL_DIRECTIONS = 1024 // or FULLY_RANDOM
  11. RADIAL_SUBDIVISIONS = 1024
  12. CHECKPOINT_INFILE = basename & ".cp"
  13. CHECKPOINT_OUTFILE = basename & ".cp"
  14. CHECKPOINT_ITERATIONS = 125000
  15. CHECKPOINT_REALTIME = 5:00 NOEXIT
  16. MICROSCOPIC_REVERSIBILITY = FALSE // or TRUE or SURFACE_ONLY or VOLUME_ONLY
  17. COMPLEX_PLACEMENT_ATTEMPTS = 20