 Adam Husar
|
c1443eadb7
Added support for copy.deepcopy of API objects
|
3 年之前 |
|
Adam Husar
|
e53f1604fd
Added support for shallow copy of API objects
|
3 年之前 |
|
Adam Husar
|
c91b597983
Updated location of libbng's main CMakeLists.txt file and set bin
|
3 年之前 |
|
Adam Husar
|
197152e085
Merge remote-tracking branch 'origin/mcell4_dev' into mcell4_random_mol_shuffle
|
3 年之前 |
|
Adam Husar
|
a09a274a07
Disabled forgotten debug macro for MCell3
|
3 年之前 |
|
Adam Husar
|
afc39661a5
Added API config option molecules_order_random_shuffle_periodicity
|
3 年之前 |
|
Adam Husar
|
af99ba00bc
Incremented version number
|
3 年之前 |
|
Adam Husar
|
e44e133dbc
Tentative event to randomly shuffle order pf molecule simulation
|
3 年之前 |
|
Adam Husar
|
7c75bc4bbb
Updated Eclipse settings
|
3 年之前 |
|
Adam Husar
|
5e6b78a767
Updated debug_config.h and changed behavior when
|
3 年之前 |
|
Adam Husar
|
8045ad6459
Removed invalid assert
|
3 年之前 |
|
Adam Husar
|
fe8752b848
Rescheduling surf mol unimol rxn according to MCell3 when a wall changes
|
3 年之前 |
|
Adam Husar
|
e41133b50f
Renamed subpartition -> subpart
|
3 年之前 |
|
Adam Husar
|
e7344c698d
Merged find_volume_mol_reactions_with_surf_classes and
|
3 年之前 |
|
Adam Husar
|
44a7f04db5
An other set of refactors and TODO fixes
|
3 年之前 |
|
Adam Husar
|
007006b770
First check for restricted regions in
|
3 年之前 |
|
Adam Husar
|
3c85189ce0
Moved Geometry::compute_region_bounding_box to a method of Region
|
3 年之前 |
|
Adam Husar
|
4f40600ef9
Cleaned up TODOs and refactored code
|
3 年之前 |
|
Adam Husar
|
84d8104fce
Removed unused PartitionShrinkEvent
|
3 年之前 |
|
Adam Husar
|
15b5ffc428
Removed several old TODOs
|
3 年之前 |
|
Adam Husar
|
14dc552561
Fixed handling of case when point is at partition boundary in
|
3 年之前 |
|
Adam Husar
|
637bd5640c
Support for counting of missed rxns, renamed FLT_GIGANTIC to
|
3 年之前 |
|
Adam Husar
|
ad329209f3
Added script to run MCell3 in parallel
|
3 年之前 |
|
Adam Husar
|
a595ead77f
Incremented version number
|
3 年之前 |
|
Adam Husar
|
7a2c9cb563
Fixed handling of case when rxn ALL_MOLECULES + surf_class -> 0 was not
|
3 年之前 |
|
Adam Husar
|
e5c9081092
Renamed bnglib to libbng
|
3 年之前 |
|
Adam Husar
|
2230866af0
Support for conversion of species superclasses with orientation or
|
3 年之前 |
|
Adam Husar
|
c272ae1382
Using sampling frequency to set n_steps for BNGL export
|
3 年之前 |
|
Adam Husar
|
8be86237c4
Improved error message wehn rel sirte in data model does not have
|
3 年之前 |
|
Adam Husar
|
c4efef42fd
Added option to Model.export_to_bngl to set simulation method
|
3 年之前 |
