 Adam Husar
|
2148334198
Preparation for multi-compartment BNGL export
|
3 年之前 |
|
Adam Husar
|
13d802eacd
Moved BNGL export code to a separate file
|
3 年之前 |
|
Adam Husar
|
f9ab653f7f
Workaround for possible macos clang compiler issue
|
3 年之前 |
|
Adam Husar
|
1fbe49d56a
Fixed segfault when which_unimolecular is called for
|
3 年之前 |
|
Adam Husar
|
f4360894b7
Removed old pymcell3 files that caused github dependabot alerts
|
3 年之前 |
 Adam Husar
|
d75d09b4e8
Added undef of HAVE_UNISTD_H missing for Windows
|
3 年之前 |
|
Adam Husar
|
dd2b2820ae
Incremented version number
|
3 年之前 |
|
Adam Husar
|
315c16037c
Using subdirectory bng in bng_runner
|
3 年之前 |
|
Adam Husar
|
0af6dd14eb
Added assert to check that reactant's name is set.
|
3 年之前 |
|
Adam Husar
|
e6c4318574
Added checks for too high number of molecules to be released.
|
3 年之前 |
|
Adam Husar
|
3f0024882b
Fixed shuffle_schedulable_molecule_ids when there are no molecules to be
|
3 年之前 |
|
Adam Husar
|
9bb766b998
Grammatical revision of the bngl, file formats, and index sections
|
3 年之前 |
|
Adam Husar
|
0ade8f0d4f
Grammatical revision of the overview section.
|
3 年之前 |
|
Adam Husar
|
889aea3576
Finished section on model conversions.
|
3 年之前 |
|
Adam Husar
|
650c85f5de
Finished section in installation.
|
3 年之前 |
|
Adam Husar
|
35761a8183
Completed CellBlender installation documentation
|
3 年之前 |
|
Adam Husar
|
74143f09de
Added documentaiton on installation under MacOS
|
3 年之前 |
|
Adam Husar
|
7e06b8d87f
Updated documentation based on comments from Mohammad
|
3 年之前 |
|
Adam Husar
|
3adaf34413
Fixed log location and case when extra arg was not provided
|
3 年之前 |
|
Adam Husar
|
7457dc7016
Added option to pass an extra argument
|
3 年之前 |
|
Adam Husar
|
03a84bc4a6
Moved call to custom_config to be run after all components were added.
|
3 年之前 |
|
Adam Husar
|
bcb34c4bef
Fixed invalid access to CountBuffer.data
|
3 年之前 |
|
Adam Husar
|
410a24d5aa
Added support for model exports with GDAT output format
|
3 年之前 |
|
Adam Husar
|
365c2788bb
Added support for gdat file format output, exports to other formats are
|
3 年之前 |
|
Adam Husar
|
ccee2366bd
Prepared counts for support of .gdat output format
|
3 年之前 |
|
Adam Husar
|
54c3fc7c8c
Changed periodical buffer flushing for iteration-based to time-based.
|
3 年之前 |
|
Adam Husar
|
dffba20358
Simplified implementation of collect_crossed_subparts
|
3 年之前 |
|
Adam Husar
|
5937b14998
Not recomputing molecule collissions if the wall hit is in the last
|
3 年之前 |
|
Adam Husar
|
6c04bb915b
Optimized usage of crossed_subparts_for_molecules in ray_trace_vol
|
3 年之前 |
|
Adam Husar
|
3773745a41
Minot optimization of Vec3
|
3 年之前 |
