 Guadalupe C. Garcia
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c0272dfced
Update sim_env_overview.rst
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3 年之前 |
 Adam Husar
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91eac53522
Added support for warning option molecule_placement_failure
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3 年之前 |
|
Adam Husar
|
2f7302ff86
Fixed printout of a warning when molecule list release could not release
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3 年之前 |
|
Adam Husar
|
8690eebd7d
Fixed check for reactant class id for species that was not used yet.
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3 年之前 |
|
Adam Husar
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126e38152d
Added support for release surface region expressions
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3 年之前 |
|
Adam Husar
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97920e4001
Fixed parameter parsing ..-E.. was not handled correctly
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3 年之前 |
|
Adam Husar
|
73fed511a3
Support for handling of use_bng_units in data model
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3 年之前 |
|
Adam Husar
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e35bae5d3b
Added option config.use_bn_units
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3 年之前 |
|
Adam Husar
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4ba650ef47
Fixing / and \ in argument names for log
|
3 年之前 |
|
Adam Husar
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adbe2af43f
Fixed CellBlender version in visualize.sh
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3 年之前 |
|
Adam Husar
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fcf1427724
Changed license from GPL to MIT, removed some empty/unused files
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3 年之前 |
|
Adam Husar
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a96855f5b1
Remvoed directory pymcell_examples
|
3 年之前 |
|
Adam Husar
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c5a1438858
Cleanup of old files
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3 年之前 |
|
Adam Husar
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b9a4974555
Merge branch 'mcell4_blender2.93_dev' of github.com:mcellteam/mcell into mcell4_blender2.93_dev
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3 年之前 |
|
Adam Husar
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1ac60c0a78
Updated documentation afters Lupe's 1st round of feedback
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3 年之前 |
|
Adam Husar
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de1f132e89
MCell executable still needs the libpython to be linked
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3 年之前 |
|
Adam Husar
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9c88c5e326
Not linking libpython on macos
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3 年之前 |
 Adam Husar
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0e9e46737c
Added argument to specify python lib path, used on Windows
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3 年之前 |
|
Adam Husar
|
2c6528dacb
Updated version marker
|
3 年之前 |
|
Adam Husar
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bd9d88f6ef
Added option Notifications.iteration_report
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3 年之前 |
|
Adam Husar
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41c49fbc5b
Linking against python 3.9
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3 年之前 |
|
Adam Husar
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b66dc6512d
Merge branch 'mcell4_surf_rxn_bngl_export' into mcell4_dev
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3 年之前 |
|
Adam Husar
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0dc4ddc1e3
Fixed export of counts with compartments into BNGL
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3 年之前 |
|
Adam Husar
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cef3414b92
Fixed computation of volume of a 3D compartment
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3 年之前 |
|
Adam Husar
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c61950d487
Tentative rework of compartment volumes, incorrect
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3 年之前 |
|
Adam Husar
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e8f012a079
Added support for BNGL export of releases into parent compartments
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3 年之前 |
|
Adam Husar
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3f21a52447
Support for export of surf mol releases to BNGL
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3 年之前 |
|
Adam Husar
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6a1f644b27
Added generation of generate_network({overwrite=>1}) into exported BNGL
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3 年之前 |
|
Adam Husar
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301ad47426
Added argument to Model.dump_internal_state and regenerated
|
3 年之前 |
|
Adam Husar
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42dacd6750
Moved compartment export into BNGEngine
|
3 年之前 |
