 Adam Husar
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2a95d3d569
Removed option -c to force cellblender viz output from DM to MCell4 conv
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3 年之前 |
|
Adam Husar
|
11f0d88ea2
Improved error message for compartment - surf region name collision
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3 年之前 |
|
Adam Husar
|
029e6e314f
Added copyright information to be printed on model initialization.
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3 年之前 |
|
Adam Husar
|
b2da7aa829
Support for export of mcell4 scripting/customization from data model
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3 年之前 |
|
Adam Husar
|
f74df4a09b
Minor change in argument passing to get_nfsim_observables_counts
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3 年之前 |
|
Adam Husar
|
8a5ebbd28c
Fixed directory changing in bng_runner, also improved scheduling
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3 年之前 |
|
Adam Husar
|
6ab903daa1
Increased version number
|
3 年之前 |
|
Adam Husar
|
c49f827b45
Improved plotter script and added a new script to run BNG2.pl in
|
3 年之前 |
|
Adam Husar
|
f6be4450ae
Fixed incorrect default for rel site shape when location is set.
|
3 年之前 |
|
Adam Husar
|
1e7c5ba856
Merge branch 'mcell4_dev' of [email protected]:mcellteam/mcell.git into mcell4_dev
|
3 年之前 |
|
ahusar
|
caa24f4485
Fixed FSUtils::get_parent_path
|
3 年之前 |
|
Adam Husar
|
d415147165
Changed all input API Vec3 arguments to use List[float]
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3 年之前 |
|
Adam Husar
|
d2f3b675e8
Fixed condition for linking of std++fs
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3 年之前 |
|
Adam Husar
|
a316c9c96b
Merge branch 'mcell4_dev' of https://github.com/mcellteam/mcell.git into mcell4_dev
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3 年之前 |
|
Adam Husar
|
764fc3f3ca
Fixed compiler warning
|
3 年之前 |
|
Adam Husar
|
8d1d7da073
Using posix or std::filesystem in filesystem_utils to deal with
|
3 年之前 |
|
Adam Husar
|
48c094e602
Rewritten 2D array in add_more_tile_neighbors_to_list_fast because clang
|
3 年之前 |
|
Adam Husar
|
7f6b553a40
Skipping definition of BNGL MCELL_REDEFINE parameters in parameters.py
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3 年之前 |
|
Adam Husar
|
207bde40dd
Support for Model.get_molecule_ids with pattern
|
3 年之前 |
|
Adam Husar
|
6ff7a88f82
Moved BNG-conversion related methods to new class BNGConverter,
|
3 年之前 |
|
Adam Husar
|
d4ed51aee1
Fixed time check assert in diffuse_single_molecule
|
3 年之前 |
|
Adam Husar
|
37210544dc
Removed argument subsystem from load_bngl_seed_species and
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3 年之前 |
|
Adam Husar
|
23adc99547
Moved convert_cplx* and convert_elementary_molecule_type as static
|
3 年之前 |
|
Adam Husar
|
6bfa479d0c
Parsing BNGL name directly in Complex ctor independently on subsystem
|
3 年之前 |
|
Adam Husar
|
bdf6f466ae
Made count buffer size smaller and also opening the count output files
|
3 年之前 |
|
Adam Husar
|
407409a823
Fixed setting of variable unimol rxn rate for nindiffusible molecules
|
3 年之前 |
|
Adam Husar
|
5fb06622c1
Limiting each method attribute printout on error to 64 chars to make
|
3 年之前 |
|
Adam Husar
|
d6cd9d8537
Fixed linking and include of filesystem_utils.cpp
|
3 年之前 |
|
Adam Husar
|
28926c6b92
Cleaned-up build commands text file
|
3 年之前 |
|
Adam Husar
|
ab971bf6ca
Fixed handling of surf+surf->vol rxns
|
3 年之前 |
