Adam Husar
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c93f0bd122
Improved error message when count trigget uis used in MCell4 MDL mode.
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3 年之前 |
Adam Husar
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f43346035e
Unified naming of 'rxn', all previous variants that used just 'rx' were
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3 年之前 |
Adam Husar
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10a676cae3
Setting of flag GeometryObject::is_fully_transparent for overlapping
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3 年之前 |
Adam Husar
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eae7027b28
Replaced Partition::finalize_wall_creation with finalize_walls, removed
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3 年之前 |
Adam Husar
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465591e435
Renamed Wall::precompute_wall_constants and reinit_edge_constants
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3 年之前 |
Adam Husar
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f4e5654837
Preparation for wall overlap support
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3 年之前 |
Adam Husar
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b0b12dc6d7
Using MCell4 walls overlap check with mcell -mcell4
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3 年之前 |
Adam Husar
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9149849ccf
Fixed usage of uninitialized variable
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3 年之前 |
Adam Husar
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4504c4f2c8
Added support for release probability
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3 年之前 |
Adam Husar
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c37d5fbdd4
Setting of config.molecule_placement_failure in MDL mode
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3 年之前 |
Adam Husar
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fcf1427724
Changed license from GPL to MIT, removed some empty/unused files
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3 年之前 |
Adam Husar
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ccee2366bd
Prepared counts for support of .gdat output format
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3 年之前 |
Adam Husar
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85d001e55c
Replaced region and geometry pobject id in MolOrRxnCountTerm with region
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3 年之前 |
Adam Husar
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abd68b8124
Split type LEAF of RegionExprNode into LEAF_SURFACE_REGION and
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3 年之前 |
Adam Husar
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4fd89cf948
Created a new class RegionExpr based on previous implementation in
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3 年之前 |
Adam Husar
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e41133b50f
Renamed subpartition -> subpart
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3 年之前 |
Adam Husar
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44a7f04db5
An other set of refactors and TODO fixes
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3 年之前 |
Adam Husar
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4f40600ef9
Cleaned up TODOs and refactored code
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3 年之前 |
Adam Husar
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637bd5640c
Support for counting of missed rxns, renamed FLT_GIGANTIC to
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3 年之前 |
Adam Husar
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7a2c9cb563
Fixed handling of case when rxn ALL_MOLECULES + surf_class -> 0 was not
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3 年之前 |
Adam Husar
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c9b75ec5b6
Added support for new visualization binary format v2
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3 年之前 |
Adam Husar
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af9b27b795
Replaced all uses of float_t with double
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3 年之前 |
Adam Husar
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1ec9bde4c2
Tentative alignment of subpart to a rounded float32 number
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3 年之前 |
Adam Husar
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d90f83d977
Merge remote-tracking branch 'origin/mcell4_dev' into mcell4_pos_float
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3 年之前 |
Adam Husar
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9ad3235cad
Fixed support for absorptive surface classes for surf mols
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3 年之前 |
Adam Husar
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a5144c7c98
7th set of changes towards configurable 32/64-bit pos_t
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3 年之前 |
Adam Husar
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008daf5ba3
Another set of changes towards configurable 32/64-bit type pos_t
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3 年之前 |
Adam Husar
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72694586b0
Atttempt to replace float_T with pos, however unsuccesful (no difference
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3 年之前 |
Adam Husar
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0481d8963c
Improved error messages related to partition size
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3 年之前 |
Adam Husar
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e5d4538082
Preparation for surface mol+surface class rxns
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3 年之前 |