 Jacob Czech
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cdc4110432
Update dependencies in README. Fix travis.yml.
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7 年之前 |
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Jacob Czech
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fd74bc886a
MCellR: Update submodule to tweak rxnout filename.
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7 年之前 |
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Jacob Czech
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8d325f3e94
MCellR: add seed value to reaction output.
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7 年之前 |
 Tom Bartol
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f28bfc04ca
Merged in Tom's tweaks to python scripts for MCell-R into Jacob's tweaks.
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7 年之前 |
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Tom Bartol
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ffbcc41728
Modify mdlr2mdl.py to no longer require mcellr.yaml to get paths
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7 年之前 |
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Tom Bartol
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eec576124e
add field number to string formatting
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7 年之前 |
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Jacob Czech
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8ab2050a96
Fix MCellR build on OSX.
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7 年之前 |
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Jacob Czech
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e10dbc6f26
Update nfsimCinterface submodule.
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7 年之前 |
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Jacob Czech
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901969d26f
Update README to include submodule instructions.
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7 年之前 |
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Jacob Czech
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a9b152c6d2
Update nfsimCinterface submodule
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7 年之前 |
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Jacob Czech
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5ad8a7622c
Use mcellteam's nfsimCinterface for submodule.
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7 年之前 |
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Jacob Czech
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cb37651b23
Clean up write_mdl a little.
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7 年之前 |
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Jacob Czech
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507938cc99
Add ability to change output frequency w MCellR
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7 年之前 |
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Jacob Czech
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c43b0fcf79
Add missing file to CMakeLists.txt.
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7 年之前 |
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Jacob Czech
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98d3daf3d7
Add support for reading pickle data models.
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7 年之前 |
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Jacob Czech
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833a919484
Add logging messages to data model importer.
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7 年之前 |
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Jacob Czech
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f749696bde
Add more logging messages.
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7 年之前 |
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Jacob Czech
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fafd98f316
Change MCellR flag from -n to -r (for rules)
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7 年之前 |
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Jacob Czech
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7000f05ee7
Refactor last commit.
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7 年之前 |
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Jacob Czech
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fdd168b4b3
Can apply SCs to all (vol/surf) mols w/ pymcell
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7 年之前 |
|
Jacob Czech
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737c862ccf
Bugfix: check against item in list instead of item
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7 年之前 |
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Jacob Czech
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b624d728d9
Bugfix: object release was broken with dm importer
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7 年之前 |
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Jacob Czech
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cfbb9c44c1
Make bionetgen submodule work with build system.
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7 年之前 |
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Jacob Czech
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bfbde8bd9e
Have build system use new submodules.
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7 年之前 |
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Jacob Czech
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df002a0130
Add dependencies as submodule.
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7 年之前 |
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Jacob Czech
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44de78590f
Copy the libraries instead of linking them in.
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7 年之前 |
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Jacob Czech
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be8be0519f
Use an rpath for nfsim libraries.
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7 年之前 |
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Jacob Czech
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49148ce8fc
Add include files for creating distrib tarball
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7 年之前 |
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Jacob Czech
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6f4d157498
Resolve nfsim library issues for setup.py.
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7 年之前 |
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Jacob Czech
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c49136e22d
Fix a func protoype warnings when running setup.py
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7 年之前 |
