 Jacob Czech
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ba9835b76a
Simplify partition creation a bit.
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7 年之前 |
|
Jacob Czech
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379f6222ca
Add partitions to test_api.py
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7 年之前 |
|
Jacob Czech
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f3be1d0f88
Rename reactions and add some print statements.
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7 年之前 |
|
Jacob Czech
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956ae525dc
Small optimization to mcell_modify_rate_constant.
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7 年之前 |
|
Jacob Czech
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0b726cfde2
Clean up test_api.py.
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7 年之前 |
|
Jacob Czech
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c117eee907
Only recompute lifetimes if we really need to.
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7 年之前 |
|
Jacob Czech
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cb00dcdd90
Bugfix: rxns with non-diffusing molecules.
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7 年之前 |
|
Jacob Czech
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b6fba10560
The Python checkpoint tool works with Py2&3 now.
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8 年之前 |
|
Jacob Czech
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53317119c5
Clean up Python checkpointing utility.
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8 年之前 |
|
Jacob Czech
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777fc2e8b6
Update Python checkpointing debug tool.
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8 年之前 |
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Jacob Czech
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8581bc9e4a
Bugfix: times being incorrectly written to rxndata
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8 年之前 |
|
Jacob Czech
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9b05d59f61
Bugfix: freeing memory early prevents error msg.
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8 年之前 |
|
Jacob Czech
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25d2ff25d3
Merge branch 'mcellNeuronECC' into dynamic_meshes_pymcell
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8 年之前 |
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Jacob Czech
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f60669386a
Reverse vertex and face list.
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8 年之前 |
 Oliver K. Ernst
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524a9afaa7
Exposed num_expr_list struct necessary for specifying partitions
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8 年之前 |
|
Oliver K. Ernst
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135e4ff20f
Added choice of "concentration" for release sites
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8 年之前 |
|
Oliver K. Ernst
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fc38edb710
Added release pattern functionality
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8 年之前 |
|
Oliver K. Ernst
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2726fd7d16
Boolean logic for release sites
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8 年之前 |
|
Jacob Czech
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5b25be14d2
More refactoring. Pep8 compliance.
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8 年之前 |
|
Jacob Czech
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ec344273c4
Some minor refactoring.
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8 年之前 |
|
Jacob Czech
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b685de2055
Allow multiple objs to be updated via DG-pymcell.
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8 年之前 |
|
Jacob Czech
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d677af6155
Process surface regions with DGs and pymcell.
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8 年之前 |
|
Jacob Czech
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1ba7137284
Re-enable some PBC code. Remove commented out code
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8 年之前 |
|
Jacob Czech
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d2c607ebf3
Molec counts cause geom changes. Fix memory probs.
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8 年之前 |
|
Jacob Czech
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4e5b819eb3
Trying to generalize last commit.
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8 年之前 |
|
Jacob Czech
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dd665753d3
Proof of concept testing of pymcell and DGs.
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8 年之前 |
|
Jacob Czech
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b92084b21d
Add stub for updating geometry via pymcell.
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8 年之前 |
|
Jacob Czech
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7d533cc83f
Working builds of pymcell and mcell executable.
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8 年之前 |
|
Jacob Czech
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c778e65c92
Clean up list of files passed to SWIG_ADD_MODULE.
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8 年之前 |
|
Jacob Czech
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9c96296d21
test_api.py will run again. DG tests failing.
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8 年之前 |
