 Jed Wing
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0e8f02c8e1
Made argerror static.
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16 年之前 |
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Jed Wing
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1d38a65075
Simplified is_object_instantiated check to simply follow the chain of parent pointers to see if we hit world->root_instance eventually.
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16 年之前 |
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Jed Wing
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080b7b0396
Fixed "random" orientation in init_effectors_by_density to pick a random orientation per molecule rather than per species per wall.
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16 年之前 |
 Boris Kaminsky
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29f864bfc4
Fixed a bug in the function 'mdl_assemble_reaction()'. The flag 'all_3d' was not set correctly for the reaction involving a volume molecule and a surface.
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16 年之前 |
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Boris Kaminsky
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19236bf26f
Fixed a bug in the function 'mdl_assemble_reaction()'. The flag 'all_3d' was not set correctly for the reaction involving a volume molecule and a surface.
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16 年之前 |
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Boris Kaminsky
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98bcbbb010
Merged with trunk
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16 年之前 |
 dittrich
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d99f05164a
Added description for commands VIZ_MOLECULE_FORMAT and VIZ_MESH_FORMAT to QRG.
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16 年之前 |
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Boris Kaminsky
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5244479b08
Changed output of the grid molecule position from the center of the tile to the actual position. Changed functions 'dreamm_v3_generic_dump_grid_molecule_data()', 'dreamm_v3_ascii_dump_grid_molecule_data()', 'dx_output_effectors_on_wall()'. Removed function 'dx_output_gridpt_and_nolrmal()'. Added function 'dx_output_effector_and_normal()'.
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16 年之前 |
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Boris Kaminsky
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656be2abfd
Changed output of the grid molecule position from the center of the tile to the actual position. Changed functions 'dreamm_v3_generic_dump_grid_molecule_data()', 'dreamm_v3_ascii_dump_grid_molecule_data()', 'dx_output_effectors_on_wall()'. Removed function 'dx_output_gridpt_and_nolrmal()'. Added function 'dx_output_effector_and_normal()'.
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16 年之前 |
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Boris Kaminsky
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c0aab4d421
Merged with trunk
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16 年之前 |
 Jed Wing
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2420c7191d
Added new man page to Makefile.am so that it will be automatically installed by 'make install', and bundled by 'make dist'.
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16 年之前 |
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Jed Wing
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1a3e12644b
Added a simple MCell man page.
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16 年之前 |
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Boris Kaminsky
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54c10b0206
Merged with the trunk
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16 年之前 |
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Jed Wing
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6125184aad
Bugfix for memory corruption issue which could occur in simulations with many types of molecules that undergo volume-volume reactions.
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16 年之前 |
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Boris Kaminsky
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6e3a12d05c
Merged with trunk.
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16 年之前 |
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Jed Wing
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cf8e240d90
Merged Tom's bugfix.
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16 年之前 |
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Jed Wing
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5e855a787d
Fixes to the test suite: corrected std. dev., and added test to trigger the bug Tom just fixed.
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16 年之前 |
 Tom Bartol
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984d032f63
Fix bug in checking for proper location of release onto surfaces
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16 年之前 |
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Boris Kaminsky
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fc13df31ec
Fixed a compiler warning for CFLAGS='O3' about possible use of 'formatted' uninitialized in the function 'my_sprintf_segment()' in the file 'mdlparse_util.c:1213'.
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16 年之前 |
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Boris Kaminsky
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96467532a1
Fixed a compiler warning for CFLAGS='O3' about possible use of 'formatted' uninitialized in the function 'my_sprintf_segment()' in the file 'mdlparse_util.c:1213'.
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16 年之前 |
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Boris Kaminsky
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2acdce437b
Fixed compiler warning for CFLAGS='-O3' about possible use of 'formatted' uninitialized in the function 'my_sprintf_segment()'.
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16 年之前 |
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Boris Kaminsky
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f73e12a23c
Merged after Rex removed 'config.h.in' file from the version control
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16 年之前 |
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Jed Wing
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49c049ac81
In response to Boris' comments, I removed the generated file config.h.in and
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16 年之前 |
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Boris Kaminsky
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b1a998f59e
Merged with Jed's changes to the source files and testsuite
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16 年之前 |
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Boris Kaminsky
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bcf7482002
Initial commit
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16 年之前 |
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Jed Wing
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d7744f1a0d
Oops. I messed up the variables.mdl file when I was making last-minute
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16 年之前 |
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Jed Wing
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d63098678e
Test suite, and bug fixes made while working on the test suite.
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16 年之前 |
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Tom Bartol
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c989a190e0
E-mail notifications are now enabled for our bzr repository
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16 年之前 |
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Tom Bartol
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3936739f4e
Set reasonable defaults for release pattern.
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16 年之前 |
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Jed Wing
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71bbba905f
Added documentation for -quiet option, fixed minor comment typo.
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16 年之前 |
