 Adam Husar
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4504c4f2c8
Added support for release probability
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3 年之前 |
|
Adam Husar
|
fcf1427724
Changed license from GPL to MIT, removed some empty/unused files
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3 年之前 |
|
Adam Husar
|
c6ed8097ca
Removed 'clone' methods that are not needed anymore due to generated
|
3 年之前 |
|
Adam Husar
|
8aacc216e8
Added argument all_details to generated __str__ method to produce
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3 年之前 |
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Adam Husar
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c1443eadb7
Added support for copy.deepcopy of API objects
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3 年之前 |
|
Adam Husar
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e53f1604fd
Added support for shallow copy of API objects
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3 年之前 |
|
Adam Husar
|
af9b27b795
Replaced all uses of float_t with double
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3 年之前 |
|
Adam Husar
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3f300bc483
Vector attributes in API classes are now returned as a references to
|
3 年之前 |
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Adam Husar
|
8dd648bc78
Improved documentation in instantiation.yaml, removed unused attribute
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3 年之前 |
|
Adam Husar
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d415147165
Changed all input API Vec3 arguments to use List[float]
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3 年之前 |
|
Adam Husar
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7c3085f28d
Set of changes towards build with MSVC
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3 年之前 |
|
Adam Husar
|
a0f7456d72
Added CountTerm.initial_reactions_count to be able to checkpoint number
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3 年之前 |
|
Adam Husar
|
9bf24dd2a1
Initial export of vectors into python
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3 年之前 |
|
Adam Husar
|
88054f97f7
Export to python - handlign naming and exporting objects only once
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3 年之前 |
|
Adam Husar
|
412095f9f3
Initial generation of checkpointing code
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3 年之前 |
|
Adam Husar
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24a631af57
Finished printing of errors and warnings for cases when identical rxns
|
4 年之前 |
|
Adam Husar
|
81609fc391
Generating method eq_nonarray_attributes used in method __eq__ of
|
4 年之前 |
|
Adam Husar
|
ab723c1035
Fixed __eq__ operator for molecule and component types and instances
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4 年之前 |
|
Adam Husar
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2d5679e6c6
Added __eq__ to all API classes and makde Complex use canonical form for
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4 年之前 |
|
Adam Husar
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f82e4ebfc0
Unified MoleculeReleaseInfo and ReleaseSite by specifying orientation
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4 年之前 |
|
Adam Husar
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7fc9732ffa
Added missing space to generated API set_* methods
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4 年之前 |
|
Adam Husar
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18e490125c
Removed API class VolumeCompartment, moved related information to
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4 年之前 |
|
Adam Husar
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306a69419a
Rename API::ComplexInstance to API::Complex
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4 年之前 |
|
Adam Husar
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01dad6291a
Changed type of VizOutput.every_n_timesteps, Count.every_n_timesteps and
|
4 年之前 |
|
Adam Husar
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a2635bfff3
Changed ReleaseSite.species to .complex_instance, added check that a
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4 年之前 |
|
Adam Husar
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e4fc34b327
Added members 'bngl_species' to releases API, and generating it in
|
4 年之前 |
|
Adam Husar
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ee7b7712b9
Added support for concentration-based release to pymcell4
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4 年之前 |
|
Adam Husar
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346825a794
Added generation of method set_all_attributes_as_default_or_unset
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4 年之前 |
|
Adam Husar
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e2693ee8b0
Initial conversion of API BNG molecules and rxns into MCell4, release
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4 年之前 |
|
Adam Husar
|
701413f6c1
Renamed SingleMoleculeReleaseInfo to MoleculeReleaseInfo. Converting
|
4 年之前 |
