 Adam Husar
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57001604ab
Added option Notifications.wall_overlap_report
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3 年之前 |
|
Adam Husar
|
91eac53522
Added support for warning option molecule_placement_failure
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3 年之前 |
|
Adam Husar
|
e35bae5d3b
Added option config.use_bn_units
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3 年之前 |
|
Adam Husar
|
bd9d88f6ef
Added option Notifications.iteration_report
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3 年之前 |
|
Adam Husar
|
afc39661a5
Added API config option molecules_order_random_shuffle_periodicity
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3 年之前 |
|
Adam Husar
|
e44e133dbc
Tentative event to randomly shuffle order pf molecule simulation
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3 年之前 |
|
Adam Husar
|
6fba5a4197
Fixed documentation for Config.vacancy_search_distance, minor code
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3 年之前 |
|
Adam Husar
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f2b6417d27
Added conversions of Warnings.high_reaction_probability,
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3 年之前 |
|
Adam Husar
|
a8e250d5ce
Support for examples in documentation, added links to example files to
|
3 年之前 |
|
Adam Husar
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1f7b1789be
Added documentation to simulation_setup and submodules
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3 年之前 |
|
Adam Husar
|
f59d8e64f9
Improved documentation in model.yaml and observables.yaml
|
3 年之前 |
|
Adam Husar
|
29176f08f0
Added configuration Warnings.high_reaction_probability, started working
|
3 年之前 |
|
Adam Husar
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4c63d43057
Added handling of checkpointing signals
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3 年之前 |
|
Adam Husar
|
f4beba1019
Added option Config.append_to_count_output_data to append to reac_data
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3 年之前 |
|
Adam Husar
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0697597565
Using initial rng state when restoring a checkpoint
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3 年之前 |
|
Adam Husar
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238c1f5480
Using initial_iteration and initial_time from checkpoint
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3 年之前 |
|
Adam Husar
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50c35428b6
Renamed Config.total_iterations_hint to Config.total_iterations
|
3 年之前 |
|
Adam Husar
|
f29a7d1d51
Using different default periodicities for testing and normal runs for
|
3 年之前 |
|
Adam Husar
|
b609757112
Configurable rxn class and species cleanup periodicity
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3 年之前 |
|
Adam Husar
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a32cb5aa2f
Added API classes ChkptVolMol and ChkptSurfMol and added preparation for
|
3 年之前 |
|
Adam Husar
|
4ad2befb46
Export of RngState for checkpointing
|
3 年之前 |
|
Adam Husar
|
e262948d5e
Preparation for intermembrane surf-surf reactions
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3 年之前 |
|
Adam Husar
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08b456d05a
By default is memory check event disabled
|
4 年之前 |
|
Adam Husar
|
63b4646179
Added implementations of print_periodic_stats to give statistics on how
|
4 年之前 |
|
Adam Husar
|
997a8e7943
Added periodic memory limit checking
|
4 年之前 |
|
Adam Husar
|
8d3d11cc46
Added option Config.sort_molecules to enable sorting of molecules by
|
4 年之前 |
|
Adam Husar
|
7c74d4b586
Improved documentation generation and added generation of enums and
|
4 年之前 |
|
Adam Husar
|
23e8dd3165
Changed total_iterations_hint and argument in run_iterations to float
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4 年之前 |
|
Adam Husar
|
d0e6c39bf0
Checking overlapped walls
|
4 年之前 |
|
Adam Husar
|
15d5d890c1
Added notification settings bng_verbosity_level and
|
4 年之前 |
