 Adam Husar
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4504c4f2c8
Added support for release probability
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3 年之前 |
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Adam Husar
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fcf1427724
Changed license from GPL to MIT, removed some empty/unused files
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3 年之前 |
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Adam Husar
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e53f1604fd
Added support for shallow copy of API objects
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3 年之前 |
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Adam Husar
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1471141fc3
Added support for creating products where compartment of the reactant
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3 年之前 |
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Adam Husar
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b9728e725e
Fixed case where data model -> pymcell4 conversion did not know that an
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3 年之前 |
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Adam Husar
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f6be4450ae
Fixed incorrect default for rel site shape when location is set.
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3 年之前 |
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Adam Husar
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d415147165
Changed all input API Vec3 arguments to use List[float]
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3 年之前 |
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Adam Husar
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7c3085f28d
Set of changes towards build with MSVC
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3 年之前 |
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Adam Husar
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1e98ed451a
Fixed conversions of params startin with '_' and also fixes in
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4 年之前 |
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Adam Husar
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a2b8ed9ba9
Support for vacuum_inside_regions (negative releases)
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4 年之前 |
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Adam Husar
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a0650c3081
Semantic checks for CountTem and Release site that @IN or @OUT must not
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4 年之前 |
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Adam Husar
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f82e4ebfc0
Unified MoleculeReleaseInfo and ReleaseSite by specifying orientation
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4 年之前 |
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Adam Husar
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18e490125c
Removed API class VolumeCompartment, moved related information to
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4 年之前 |
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Adam Husar
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306a69419a
Rename API::ComplexInstance to API::Complex
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4 年之前 |
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Adam Husar
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a2635bfff3
Changed ReleaseSite.species to .complex_instance, added check that a
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4 年之前 |
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Adam Husar
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e4fc34b327
Added members 'bngl_species' to releases API, and generating it in
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4 年之前 |
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Adam Husar
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ee7b7712b9
Added support for concentration-based release to pymcell4
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4 年之前 |
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Adam Husar
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7f9a3096bb
Interm. commit - almost done InstantiationData::load_bngl_seed_species
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4 年之前 |
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Adam Husar
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e2693ee8b0
Initial conversion of API BNG molecules and rxns into MCell4, release
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4 年之前 |
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Adam Husar
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ce119fba36
Finalized support for molecule list release in pymcell4, release
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4 年之前 |
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Adam Husar
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701413f6c1
Renamed SingleMoleculeReleaseInfo to MoleculeReleaseInfo. Converting
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4 年之前 |
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Adam Husar
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92adae5da7
Extended API with SingleMoleculeReleaseInfo for release mode LIST
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4 年之前 |
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Adam Husar
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e0b79ed1d3
Intermediate commit of release pattern support in API and in python gen.
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4 年之前 |
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Adam Husar
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7b2277940d
Renamed API enums to uppercase
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4 年之前 |
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Adam Husar
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a2770fa8e2
Added support for density in release sites
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4 年之前 |
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Adam Husar
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46cee03171
GeometryObject and SurfaceRegion are now derived from Region
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4 年之前 |
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Adam Husar
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cc8ba07b3a
Initial pymcell4 support for releases onto region, not fully working yet
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4 年之前 |
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Adam Husar
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caf222307d
Added Region class, renamed SurfaceRegion to SurfaceArea, initial
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4 年之前 |
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Adam Husar
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453f78219f
Initial definition of regions
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4 年之前 |
|
Adam Husar
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154e755e14
Corrected copyright
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4 年之前 |
