 Adam Husar
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6a4d2aebc1
Fixed checkpoint storing when additional checkpoints are scheduled
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3 年之前 |
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Adam Husar
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7456ff8258
Added missing newline to exported model
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3 年之前 |
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Adam Husar
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fcf1427724
Changed license from GPL to MIT, removed some empty/unused files
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3 年之前 |
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Adam Husar
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4dc7ac4ec7
Count.count_expression simplification and refactor
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3 年之前 |
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Adam Husar
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b768a76a59
Initial step towards vectors modifiable on the Python side, created
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3 年之前 |
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Adam Husar
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c439d23086
Improved customization template comment, importing module 'shared'
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3 年之前 |
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Adam Husar
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53cf22d2d7
Support for overridable parameters when generating model from data model
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3 年之前 |
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Adam Husar
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91689625b6
Fixed species and reaction classes export when checkpointing a model
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3 年之前 |
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Adam Husar
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45ae336242
Adding species to model that are used by checkpointed molecules but not
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3 年之前 |
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Adam Husar
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a0f7456d72
Added CountTerm.initial_reactions_count to be able to checkpoint number
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3 年之前 |
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Adam Husar
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a7c4e6301b
Not exporting ALL_*MOLECULES and also importing subsystem into geometry
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3 年之前 |
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Adam Husar
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6772be3051
Added export of schedule checkpoints, using FINISHED as marker telling
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3 年之前 |
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Adam Husar
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962857cbb1
Added generation of python code that detects previous checkpoint and
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3 年之前 |
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Adam Husar
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f4beba1019
Added option Config.append_to_count_output_data to append to reac_data
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3 年之前 |
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Adam Husar
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65670c843a
Fixed addition of checkpointed molecules into partition
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3 年之前 |
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Adam Husar
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0b004dc169
Putting checkpointed molcules both vol and surf into the same array to
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3 年之前 |
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Adam Husar
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0697597565
Using initial rng state when restoring a checkpoint
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3 年之前 |
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Adam Husar
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28d83d7d31
Fixed total iteration count in checkpoint
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3 年之前 |
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Adam Husar
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1d645e90b8
Fixed handling of species superclasses in checkpoints
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3 年之前 |
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Adam Husar
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bd2928f2b4
Exporting molecules into simulation_state.py
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3 年之前 |
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Adam Husar
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a32cb5aa2f
Added API classes ChkptVolMol and ChkptSurfMol and added preparation for
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3 年之前 |
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Adam Husar
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4ad2befb46
Export of RngState for checkpointing
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3 年之前 |
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Adam Husar
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a5c14ef608
Initial model file generation for checkpointing
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3 年之前 |
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Adam Husar
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d551b4a1bf
Export of observables to python
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3 年之前 |
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Adam Husar
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df118ee0bb
Added export of geometry and instantiation to python
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3 年之前 |
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Adam Husar
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77281796cd
Initial export of subsystem into python
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3 年之前 |
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Adam Husar
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fb7a6fa370
Moved file generator_constants.h to
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3 年之前 |
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Adam Husar
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89940aae32
Added empty implementation of Model.save_checkpoint with a call to
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3 年之前 |
