 meiermark
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7366a2be43
debian stuff
|
7 年之前 |
 Daniel
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43871d5813
Fix value return for &FindPDBfile call
|
8 年之前 |
|
meiermark
|
90cde38c22
fixed missing line breaks in hhmakemodel.pl
|
9 年之前 |
 mmeier
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68f7df0733
adjusted the header of the scripts
|
9 年之前 |
|
mmeier
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aeb4201e2e
-hhit with updated neural network fot the estimation of the alignment quality
|
9 年之前 |
 soeding
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ab0bc9f549
Updated version to 2.0.16, February 2013, updated CHANGES, CHANGES_planned, hhsuite-userguide.tex
|
11 年之前 |
|
soeding
|
17743ba782
changed version string to 2.0.16 in scripts
|
11 年之前 |
 Andy Hauser
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4235b31748
Bump version to 2.0.15
|
12 年之前 |
|
soeding
|
979fe9b22a
Fixed a BAD error in hhalign.C that resulted in segfaulting even when calling without parameters: When I cleaned up the code (some time ago I transformed q and t from HMM to HMM*. The line HMM* t; needed to be changed to HMM* t = new HMM; The line t = q; needed to be replaced with *t = *q; and a delete t; was missing after the delete q;.
|
12 年之前 |
|
Andy Hauser
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426532ed84
Correct release to HHsuite version 2.0.14 (May 2012)
|
12 年之前 |
|
soeding
|
1a74ad2d94
Bug with -d option in hhmakemodel.pl fixed. Perl scripts to add to package in the future already added as comment to user guide.
|
12 年之前 |
|
soeding
|
f30a2b864d
Update of user guide to reflect changed terminology HHblits databases => HH-suite databases etc.
|
12 年之前 |
|
soeding
|
956c695ba5
* Fixed a bug that could result in segfaults during realignment stage in rare cases when one of first three hits had more than one suboptimal alignment.
|
12 年之前 |
|
soeding
|
af74f96115
version number 2.0.3, added cases for psipred3 in addss.pl
|
13 年之前 |
|
soeding
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a3dcf569b5
Cleaned up paths in HHPaths.pm, added paths to exporter
|
13 年之前 |
|
Andy Hauser
|
51c1e84805
Rename dist-scripts to scripts.
|
13 年之前 |
|
Andy Hauser
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824062dffe
Remove old scripts
|
13 年之前 |
 Michael Remmert
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44bf6ca61e
Cleaning for final release
|
13 年之前 |
 Soeding
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0f1023f52a
merge releases
|
13 年之前 |
|
Soeding
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4e783b8d5e
small esthetic changes in filtering FilterNeff()
|
13 年之前 |
 Michael Remmert
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cc25e7c254
Change "/usr/bin/perl" to "/usr/bin/env perl" in perl scripts; Update scripts to be able to run with Psipred v3; add shift parameter in HHblits
|
13 年之前 |
|
Michael Remmert
|
f5fb395d76
Fix bug with reading alignment (no sequence line between two headers); update FilterNeff method in hhalignment.C
|
13 年之前 |
|
Michael Remmert
|
c4e64ebd78
Fix problem with hhmakemodel when creating PIR alignments
|
13 年之前 |
|
Michael Remmert
|
41aff5d011
Fix bug in hhmakemodel (dont use template in PIR ali, if alignment score to bad); allow PDBfiles from dbs other than PDB or SCOP
|
13 年之前 |
 Michael Remmert
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2c59f21bf3
HHblits with SW-evalue prefilter and ungapped-SW preprefilter
|
14 年之前 |
|
Michael Remmert
|
64bed081cd
Fix bugs in hhmakemodel.pl
|
15 年之前 |
|
Michael Remmert
|
e58b0efeae
Add Evalue threshold option for multiple alignment
|
15 年之前 |
 Andreas Biegert
|
a5da544319
Initial addition of scripts to repository
|
16 年之前 |
